BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024D12SP1|AL428219
(999 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1693 1939 0.0
>3x_Contig1693
Length = 15531
Score = 1939 bits (975), Expect = 0.0
Identities = 993/999 (99%), Gaps = 2/999 (0%)
Strand = Plus / Minus
Query: 1 gatctcccaatcagtttctaggattttcttaccagtttgactaccttaatggcggtggtt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6708 gatctcccaatcagtttctaggattttcttaccagtttgactaccttaatggcggtggt- 6650
Query: 61 gccagtatgcattagtaaaggaaaawaaaaaaaaakatggtgacaattcttaacaaccac 120
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 6649 gccagtatgcattagtaaaggaaaaaaaaaaaaaagatggtgacaattcttaacaaccac 6590
Query: 121 ttgtctcattccgggcaccgattaacgactgtctgttggtcccgcagtcactgtgcttcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6589 ttgtctcattccgggcaccgattaacgactgtctgttggtcccgcagtcactgtgcttcg 6530
Query: 181 cttcgtatcatcatgacagattatagtgttattgtcattggagcgggaatctctgggtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6529 cttcgtatcatcatgacagattatagtgttattgtcattggagcgggaatctctgggtta 6470
Query: 241 aaagctaccagcgatctggtcaagagtggtatagaatcggtgatttgcatcgaatcacgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6469 aaagctaccagcgatctggtcaagagtggtatagaatcggtgatttgcatcgaatcacgt 6410
Query: 301 gatcgtgtcggaggtaggctgaataccagacaaggtcgcaatggcaagtacgatattggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6409 gatcgtgtcggaggtaggctgaataccagacaaggtcgcaatggcaagtacgatattggc 6350
Query: 361 gggtcttggcatcacgatactttgagcaatggtttgtttatggaagamatgtcgttgccc 420
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 6349 gggtcttggcatcacgatactttgagcaatggtttgtttatggaagaaatgtcgttgccc 6290
Query: 421 gagagcgaaagggcagggtttgtattcgatgatgaggacagggcatgcctcgttgataaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6289 gagagcgaaagggcagggtttgtattcgatgatgaggacagggcatgcctcgttgataaa 6230
Query: 481 aaattaggagttcttgaagtggatcagttggaatgtttagcatatgaatttgagaaatgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6229 aaattaggagttcttgaagtggatcagttggaatgtttagcatatgaatttgagaaatgg 6170
Query: 541 gtcgagatgagatattatgattcacttgacgtagaagacgtgtcttattttcaactttgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6169 gtcgagatgagatattatgattcacttgacgtagaagacgtgtcttattttcaactttgt 6110
Query: 601 atcgaattctgtttcagtagaaaagaatttttgaccgatgaacagctctaccatttacca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6109 atcgaattctgtttcagtagaaaagaatttttgaccgatgaacagctctaccatttacca 6050
Query: 661 caattgttaagatacatggaattgtggcatggtgttgattggtatgcactaagtgggaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6049 caattgttaagatacatggaattgtggcatggtgttgattggtatgcactaagtgggaag 5990
Query: 721 tggtctgggattgaacacaatggaagaaatgcgttagttttacactatgacaaaattttg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5989 tggtctgggattgaacacaatggaagaaatgcgttagttttacactatgacaaaattttg 5930
Query: 781 gctagaatttcgaatccagtcaaggataagatccatttgagcgaatctgtgaacctgawt 840
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 5929 gctagaatttcgaatccagtcaaggataagatccatttgagcgaatctgtgaacctga-t 5871
Query: 841 taagaaattgtcaaatgggaaatatcaagtcaacactgacaagggtaaatatttgtgtga 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5870 taagaaattgtcaaatgggaaatatcaagtcaacactgacaagggtaaatatttgtgtga 5811
Query: 901 ttattgcattgtaacagtaccacaatctgtgttggccatatcttgtgagcaggaggagaa 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5810 ttattgcattgtaacagtaccacaatctgtgttggccatatcttgtgagcaggaggagaa 5751
Query: 961 tgamttttctcatatgaggaaagctcgtatcgggtttga 999
||| |||||||||||||||||||||||||||||||||||
Sbjct: 5750 tgaattttctcatatgaggaaagctcgtatcgggtttga 5712
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6525
Number of Sequences: 1807
Number of extensions: 6525
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 999
length of database: 10,358,551
effective HSP length: 16
effective length of query: 983
effective length of database: 10,329,639
effective search space: 10154035137
effective search space used: 10154035137
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)